Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
WNT3AP56704 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 ST13P19-201ENST00000442505 1124 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT3AP56704 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL160314.3-201ENST00000556041 767 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT3AP56704 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.67□□□□□ -0.06
WNT3AP56704 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT3AP56704 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.67□□□□□ -0.06
WNT3AP56704 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AC144522.1-201ENST00000625111 1658 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
WNT3AP56704 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 AC011474.4-201ENST00000623523 2076 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.67□□□□□ -0.06
WNT3AP56704 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
WNT3AP56704 AC041040.2-201ENST00000622926 2899 ntBASIC14.67□□□□□ -0.06
WNT3AP56704 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT3AP56704 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT3AP56704 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT3AP56704 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 MIR663B-201ENST00000408361 115 ntBASIC14.66□□□□□ -0.06
WNT3AP56704 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT3AP56704 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.66□□□□□ -0.06
WNT3AP56704 AC021723.1-201ENST00000486306 515 ntBASIC14.66□□□□□ -0.06
WNT3AP56704 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT3AP56704 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.66□□□□□ -0.06
WNT3AP56704 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms