Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 AC025279.2-201ENST00000569730 653 ntBASIC15.96■□□□□ 0.15
USP8P40818 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.96■□□□□ 0.15
USP8P40818 AL022328.1-201ENST00000610050 478 ntBASIC15.96■□□□□ 0.15
USP8P40818 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
USP8P40818 IGHV3-72-202ENST00000621503 303 ntBASIC15.96■□□□□ 0.15
USP8P40818 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
USP8P40818 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 AC015688.4-201ENST00000580780 1647 ntBASIC15.96■□□□□ 0.15
USP8P40818 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
USP8P40818 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.96■□□□□ 0.15
USP8P40818 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
USP8P40818 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
USP8P40818 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
USP8P40818 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
USP8P40818 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
USP8P40818 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
USP8P40818 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.96■□□□□ 0.14
USP8P40818 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.96■□□□□ 0.14
USP8P40818 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
USP8P40818 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.95■□□□□ 0.14
USP8P40818 CU639417.3-201ENST00000624240 1404 ntBASIC15.95■□□□□ 0.14
USP8P40818 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
USP8P40818 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
USP8P40818 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.95■□□□□ 0.14
USP8P40818 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.95■□□□□ 0.14
USP8P40818 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.95■□□□□ 0.14
USP8P40818 USP32P1-208ENST00000506594 1164 ntBASIC15.95■□□□□ 0.14
USP8P40818 AL391280.1-201ENST00000506969 1062 ntBASIC15.95■□□□□ 0.14
USP8P40818 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.95■□□□□ 0.14
USP8P40818 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
USP8P40818 GNRHR2-203ENST00000581100 1187 ntBASIC15.95■□□□□ 0.14
USP8P40818 AC233724.13-201ENST00000598383 410 ntBASIC15.95■□□□□ 0.14
USP8P40818 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
USP8P40818 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
USP8P40818 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.95■□□□□ 0.14
USP8P40818 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
USP8P40818 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
USP8P40818 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.94■□□□□ 0.14
USP8P40818 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
USP8P40818 AC092053.3-201ENST00000641308 4975 ntBASIC15.94■□□□□ 0.14
USP8P40818 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.94■□□□□ 0.14
USP8P40818 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
USP8P40818 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
USP8P40818 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 KRT17P7-201ENST00000451704 1104 ntBASIC15.94■□□□□ 0.14
USP8P40818 FTH1P14-201ENST00000482930 551 ntBASIC15.94■□□□□ 0.14
USP8P40818 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.94■□□□□ 0.14
USP8P40818 AC131206.1-201ENST00000538078 1211 ntBASIC15.94■□□□□ 0.14
USP8P40818 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.94■□□□□ 0.14
USP8P40818 BTNL10-201ENST00000595971 695 ntBASIC15.94■□□□□ 0.14
USP8P40818 AC138696.2-201ENST00000607376 223 ntBASIC15.94■□□□□ 0.14
USP8P40818 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 AC132938.4-201ENST00000623835 848 ntBASIC15.94■□□□□ 0.14
USP8P40818 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.94■□□□□ 0.14
USP8P40818 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.94■□□□□ 0.14
USP8P40818 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
USP8P40818 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
USP8P40818 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms