Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 AC060814.4-201ENST00000594169 2163 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 AP003969.2-201ENST00000623739 2275 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 AL157996.1-201ENST00000624684 2299 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN1P35523 DDX12P-201ENST00000432996 2947 ntBASIC16.6■□□□□ 0.25
CLCN1P35523 AC022144.1-201ENST00000602255 1580 ntBASIC16.6■□□□□ 0.25
CLCN1P35523 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 AL021155.1-201ENST00000438808 2637 ntBASIC16.6■□□□□ 0.25
CLCN1P35523 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLCN1P35523 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCN1P35523 RFPL4AP1-201ENST00000530883 850 ntBASIC16.6■□□□□ 0.25
CLCN1P35523 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.6■□□□□ 0.25
CLCN1P35523 AC005498.2-205ENST00000593218 784 ntBASIC16.6■□□□□ 0.25
CLCN1P35523 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCN1P35523 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN1P35523 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN1P35523 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 PAM-203ENST00000346918 3302 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
CLCN1P35523 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.59■□□□□ 0.25
CLCN1P35523 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN1P35523 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.59■□□□□ 0.25
CLCN1P35523 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 AC000095.1-201ENST00000603208 874 ntBASIC16.59■□□□□ 0.25
CLCN1P35523 AL391069.4-201ENST00000609583 481 ntBASIC16.59■□□□□ 0.25
CLCN1P35523 AC004790.1-201ENST00000612686 536 ntBASIC16.59■□□□□ 0.25
CLCN1P35523 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLCN1P35523 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 AL355102.3-201ENST00000554299 1678 ntBASIC16.59■□□□□ 0.25
CLCN1P35523 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN1P35523 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN1P35523 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCN1P35523 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms