Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC3P19447 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC3P19447 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
ERCC3P19447 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC3P19447 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC3P19447 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC3P19447 NPM1P43-201ENST00000558669 786 ntBASIC16.85■□□□□ 0.29
ERCC3P19447 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.85■□□□□ 0.29
ERCC3P19447 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 AC087045.2-201ENST00000606279 1003 ntBASIC16.85■□□□□ 0.29
ERCC3P19447 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 AC092171.5-201ENST00000608012 942 ntBASIC16.85■□□□□ 0.29
ERCC3P19447 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC3P19447 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 TMBIM7P-202ENST00000641474 1516 ntBASIC16.85■□□□□ 0.29
ERCC3P19447 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 LINC01165-201ENST00000445190 1623 ntBASIC16.85■□□□□ 0.29
ERCC3P19447 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC3P19447 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC3P19447 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 AC015909.3-201ENST00000572855 1794 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
ERCC3P19447 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ERCC3P19447 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 AC018529.2-202ENST00000611482 3087 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ERCC3P19447 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC3P19447 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC3P19447 AC078991.1-201ENST00000437297 610 ntBASIC16.84■□□□□ 0.29
ERCC3P19447 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms