Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.95□□□□□ -0.02
ERCC2P18074 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ERCC2P18074 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERCC2P18074 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ERCC2P18074 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 POM121L10P-201ENST00000436994 1285 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 BNIP3P13-201ENST00000599968 566 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.94□□□□□ -0.02
ERCC2P18074 AC007663.3-201ENST00000609632 465 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 AC091271.1-201ENST00000611877 1162 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 AC133540.1-201ENST00000620845 1019 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 AC022748.3-201ENST00000621828 275 ntBASIC14.94□□□□□ -0.02
ERCC2P18074 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.94□□□□□ -0.02
ERCC2P18074 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ERCC2P18074 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERCC2P18074 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.93□□□□□ -0.02
ERCC2P18074 TUBB8P4-201ENST00000511806 1324 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 AC018735.1-201ENST00000437208 1502 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 AC004899.1-201ENST00000424687 1714 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ERCC2P18074 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.93□□□□□ -0.02
ERCC2P18074 MIR1908-201ENST00000410394 80 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 VDAC1P1-201ENST00000439229 848 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.93□□□□□ -0.02
ERCC2P18074 SCARNA21-201ENST00000517026 139 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 FAM8A2P-201ENST00000528813 1142 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.93□□□□□ -0.02
ERCC2P18074 AC003686.1-201ENST00000550956 1034 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.93□□□□□ -0.02
ERCC2P18074 AC008805.1-201ENST00000590892 364 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.93□□□□□ -0.02
ERCC2P18074 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ERCC2P18074 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.93□□□□□ -0.02
ERCC2P18074 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ERCC2P18074 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms