Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 AC069218.1-201ENST00000435269 762 ntBASIC11.4□□□□□ -0.58
CD28P10747 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 FGFR3P1-201ENST00000449999 601 ntBASIC11.4□□□□□ -0.58
CD28P10747 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 AL109954.1-202ENST00000564051 2148 ntBASIC11.4□□□□□ -0.58
CD28P10747 MIR4754-201ENST00000582477 89 ntBASIC11.4□□□□□ -0.58
CD28P10747 MIR5572-201ENST00000583188 137 ntBASIC11.4□□□□□ -0.58
CD28P10747 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 AC007718.1-201ENST00000621078 280 ntBASIC11.4□□□□□ -0.58
CD28P10747 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CD28P10747 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CD28P10747 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.4□□□□□ -0.59
CD28P10747 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD28P10747 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CD28P10747 TMBIM7P-202ENST00000641474 1516 ntBASIC11.4□□□□□ -0.59
CD28P10747 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.4□□□□□ -0.59
CD28P10747 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CD28P10747 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CD28P10747 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC11.39□□□□□ -0.59
CD28P10747 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.39□□□□□ -0.59
CD28P10747 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 AC008723.1-201ENST00000506922 207 ntBASIC11.39□□□□□ -0.59
CD28P10747 AC091951.1-201ENST00000512854 2465 ntBASIC11.39□□□□□ -0.59
CD28P10747 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.39□□□□□ -0.59
CD28P10747 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.39□□□□□ -0.59
CD28P10747 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC11.39□□□□□ -0.59
CD28P10747 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD28P10747 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
CD28P10747 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC11.39□□□□□ -0.59
CD28P10747 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
CD28P10747 AL109837.1-201ENST00000603272 613 ntBASIC11.39□□□□□ -0.59
CD28P10747 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms