Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AL157414.3-201ENST00000624276 1954 ntBASIC16.64■□□□□ 0.25
TPM2P07951 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.64■□□□□ 0.25
TPM2P07951 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM2P07951 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 AC092580.3-201ENST00000430932 139 ntBASIC16.64■□□□□ 0.25
TPM2P07951 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TPM2P07951 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.64■□□□□ 0.25
TPM2P07951 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.64■□□□□ 0.25
TPM2P07951 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM2P07951 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TPM2P07951 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TPM2P07951 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM2P07951 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.64■□□□□ 0.25
TPM2P07951 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC16.63■□□□□ 0.25
TPM2P07951 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TPM2P07951 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
TPM2P07951 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 MIR943-201ENST00000401286 94 ntBASIC16.63■□□□□ 0.25
TPM2P07951 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 NUS1P3-201ENST00000423502 862 ntBASIC16.63■□□□□ 0.25
TPM2P07951 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM2P07951 RPL13AP25-201ENST00000484130 612 ntBASIC16.63■□□□□ 0.25
TPM2P07951 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.63■□□□□ 0.25
TPM2P07951 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM2P07951 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM2P07951 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 TP73-201ENST00000346387 4854 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM2P07951 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM2P07951 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TPM2P07951 AC015819.3-201ENST00000624305 2674 ntBASIC16.63■□□□□ 0.25
TPM2P07951 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TPM2P07951 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM2P07951 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM2P07951 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM2P07951 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TPM2P07951 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM2P07951 AC111170.3-201ENST00000624282 2464 ntBASIC16.62■□□□□ 0.25
TPM2P07951 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM2P07951 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms