Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
APOC1P02654 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 AL359881.3-201ENST00000602640 1721 ntBASIC12.96□□□□□ -0.33
APOC1P02654 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC1P02654 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC1P02654 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC1P02654 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.96□□□□□ -0.33
APOC1P02654 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 AC098614.1-201ENST00000368528 745 ntBASIC12.96□□□□□ -0.33
APOC1P02654 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 AC236430.1-201ENST00000402231 743 ntBASIC12.96□□□□□ -0.33
APOC1P02654 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 AL355864.2-201ENST00000447420 863 ntBASIC12.96□□□□□ -0.33
APOC1P02654 AC011495.1-201ENST00000498085 584 ntBASIC12.96□□□□□ -0.33
APOC1P02654 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.96□□□□□ -0.33
APOC1P02654 GCOM2-201ENST00000509133 1104 ntBASIC12.96□□□□□ -0.33
APOC1P02654 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.96□□□□□ -0.33
APOC1P02654 AC190387.1-201ENST00000551683 408 ntBASIC12.96□□□□□ -0.33
APOC1P02654 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 AC138696.2-201ENST00000607376 223 ntBASIC12.96□□□□□ -0.33
APOC1P02654 BX088702.1-201ENST00000610784 235 ntBASIC12.96□□□□□ -0.33
APOC1P02654 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 AC097359.2-201ENST00000604992 2389 ntBASIC12.96□□□□□ -0.33
APOC1P02654 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOC1P02654 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
APOC1P02654 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC1P02654 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
APOC1P02654 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC1P02654 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
APOC1P02654 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
APOC1P02654 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.96□□□□□ -0.34
APOC1P02654 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.96□□□□□ -0.34
APOC1P02654 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC1P02654 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.96□□□□□ -0.34
APOC1P02654 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
APOC1P02654 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.96□□□□□ -0.34
APOC1P02654 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOC1P02654 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.96□□□□□ -0.34
APOC1P02654 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 AC090505.1-201ENST00000430515 1834 ntBASIC12.95□□□□□ -0.34
APOC1P02654 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 TPM3P8-201ENST00000330554 643 ntBASIC12.95□□□□□ -0.34
APOC1P02654 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
APOC1P02654 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 AP006294.1-201ENST00000415407 339 ntBASIC12.95□□□□□ -0.34
APOC1P02654 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.95□□□□□ -0.34
APOC1P02654 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
APOC1P02654 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 AC068587.3-201ENST00000526613 355 ntBASIC12.95□□□□□ -0.34
APOC1P02654 TDH-203ENST00000531764 1110 ntBASIC12.95□□□□□ -0.34
APOC1P02654 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.95□□□□□ -0.34
APOC1P02654 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC1P02654 AC145423.3-201ENST00000615987 467 ntBASIC12.95□□□□□ -0.34
APOC1P02654 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms