Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC023908.3-201ENST00000564211 3047 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 AC013726.1-201ENST00000563747 2285 ntBASIC13□□□□□ -0.33
CNOT4O95628 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 AL590440.2-201ENST00000641973 1595 ntBASIC13□□□□□ -0.33
CNOT4O95628 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 AL008707.1-201ENST00000422498 534 ntBASIC13□□□□□ -0.33
CNOT4O95628 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13□□□□□ -0.33
CNOT4O95628 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13□□□□□ -0.33
CNOT4O95628 AC106794.1-201ENST00000506935 792 ntBASIC13□□□□□ -0.33
CNOT4O95628 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13□□□□□ -0.33
CNOT4O95628 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 AC016629.1-201ENST00000596579 586 ntBASIC13□□□□□ -0.33
CNOT4O95628 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CNOT4O95628 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13□□□□□ -0.33
CNOT4O95628 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
CNOT4O95628 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CNOT4O95628 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.99□□□□□ -0.33
CNOT4O95628 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.99□□□□□ -0.33
CNOT4O95628 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.99□□□□□ -0.33
CNOT4O95628 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.99□□□□□ -0.33
CNOT4O95628 BX284668.4-201ENST00000453917 508 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 CICP12-201ENST00000455801 843 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 UPF3AP2-201ENST00000457924 1132 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 SERPINA13P-202ENST00000478994 924 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.99□□□□□ -0.33
CNOT4O95628 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.99□□□□□ -0.33
CNOT4O95628 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 AC103988.2-201ENST00000561804 725 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 RN7SL163P-201ENST00000583100 276 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 BNIP3P13-201ENST00000599968 566 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.99□□□□□ -0.33
CNOT4O95628 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CNOT4O95628 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms