Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NDUFS3O75489 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.53□□□□□ -0.08
NDUFS3O75489 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.53□□□□□ -0.08
NDUFS3O75489 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.53□□□□□ -0.08
NDUFS3O75489 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.53□□□□□ -0.08
NDUFS3O75489 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.53□□□□□ -0.08
NDUFS3O75489 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.53□□□□□ -0.08
NDUFS3O75489 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFS3O75489 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NDUFS3O75489 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
NDUFS3O75489 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NDUFS3O75489 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NDUFS3O75489 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NDUFS3O75489 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.52□□□□□ -0.08
NDUFS3O75489 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFS3O75489 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NDUFS3O75489 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 AC079776.1-201ENST00000401540 1152 ntBASIC14.52□□□□□ -0.09
NDUFS3O75489 MIR1909-201ENST00000411312 80 ntBASIC14.52□□□□□ -0.09
NDUFS3O75489 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 GPR53P-205ENST00000457298 1084 ntBASIC14.52□□□□□ -0.09
NDUFS3O75489 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.52□□□□□ -0.09
NDUFS3O75489 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.52□□□□□ -0.09
NDUFS3O75489 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.52□□□□□ -0.09
NDUFS3O75489 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NDUFS3O75489 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.52□□□□□ -0.09
NDUFS3O75489 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NDUFS3O75489 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.52□□□□□ -0.09
NDUFS3O75489 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NDUFS3O75489 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFS3O75489 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.51□□□□□ -0.09
NDUFS3O75489 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NDUFS3O75489 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NDUFS3O75489 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms