Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 BX284668.4-201ENST00000453917 508 ntBASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 KRT8P13-201ENST00000463294 1010 ntBASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC093752.3-201ENST00000567343 901 ntBASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 LINC01165-201ENST00000445190 1623 ntBASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV5-4A0A0C4DH59 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 GPAA1P2-201ENST00000417923 928 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC011742.3-201ENST00000439053 820 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 EIF4HP1-201ENST00000453115 687 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL022334.2-201ENST00000610000 484 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AC100757.4-201ENST00000626934 759 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 AL805961.1-203ENST00000641078 1258 ntBASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV5-4A0A0C4DH59 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms