Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 MKNK2P1-201ENST00000437526 628 ntBASIC13.8□□□□□ -0.2
AP4S1Q9Y587 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 AC026434.2-201ENST00000506094 1078 ntBASIC13.8□□□□□ -0.2
AP4S1Q9Y587 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 KRT18P8-201ENST00000581937 1246 ntBASIC13.8□□□□□ -0.2
AP4S1Q9Y587 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 DRD5P1-201ENST00000456605 1438 ntBASIC13.8□□□□□ -0.2
AP4S1Q9Y587 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.8□□□□□ -0.2
AP4S1Q9Y587 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 AL627223.1-201ENST00000416693 442 ntBASIC13.79□□□□□ -0.2
AP4S1Q9Y587 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 AC131206.1-201ENST00000538078 1211 ntBASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 PRSS30P-206ENST00000641773 873 ntBASIC13.79□□□□□ -0.2
AP4S1Q9Y587 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 CSPG4P11-201ENST00000560634 4910 ntBASIC13.79□□□□□ -0.2
AP4S1Q9Y587 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP4S1Q9Y587 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 PCDHA6-201ENST00000378126 3267 ntBASIC13.78□□□□□ -0.2
AP4S1Q9Y587 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP4S1Q9Y587 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms