Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CEP164P1-201ENST00000455142 418 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 IGLV3-15-201ENST00000518356 244 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 RBM8B-201ENST00000555532 525 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AC103691.2-201ENST00000618824 433 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AC144522.1-201ENST00000625111 1658 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 SNX18-202ENST00000343017 3140 ntBASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 TBC1D3J-201ENST00000620719 1426 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 NOC2LP1-201ENST00000450578 752 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC006122.1-201ENST00000493323 440 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC008723.1-201ENST00000506922 207 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 MIR7845-201ENST00000618396 99 ntBASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.68■□□□□ 0.1
SSX2IPQ9Y2D8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSX2IPQ9Y2D8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms