Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AC100827.2-201ENST00000563214 1194 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 AC244250.3-201ENST00000620749 366 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 KRT8P28-201ENST00000433288 1390 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 FAM90A2P-201ENST00000511144 1395 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 FAM90A25P-201ENST00000528404 1395 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 RN7SL832P-201ENST00000607781 1756 ntBASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HPS5Q9UPZ3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 RN7SL258P-201ENST00000478664 300 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AP003398.1-201ENST00000531124 318 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 MIR4783-201ENST00000580343 82 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AC005632.3-201ENST00000605544 308 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AC011498.7-201ENST00000624986 2027 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS5Q9UPZ3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC117489.1-201ENST00000625169 3217 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC010141.1-201ENST00000411585 623 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 ACTBP7-201ENST00000418351 1124 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 PSMD4P1-201ENST00000433951 1109 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 CICP12-201ENST00000455801 843 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 RPL18AP3-201ENST00000462885 528 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC026410.1-201ENST00000507366 1101 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC009779.1-201ENST00000551138 283 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC026803.1-201ENST00000569130 274 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 AC105137.3-201ENST00000617588 984 ntBASIC17.23■□□□□ 0.35
HPS5Q9UPZ3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms