Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AL592076.1-201ENST00000424448 303 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 FGFR3P1-201ENST00000449999 601 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 PCDHA3-202ENST00000532566 4594 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 SIGLEC18P-201ENST00000602271 909 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC104506.1-201ENST00000609247 429 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC113367.3-201ENST00000508316 1912 ntBASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
DENND2AQ9ULE3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 RPS9P1-201ENST00000419943 583 ntBASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 KRT8P1-201ENST00000557533 1207 ntBASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 MIR4722-201ENST00000578292 60 ntBASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DENND2AQ9ULE3 AC232323.1-201ENST00000540724 2099 ntBASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 KRT17P5-201ENST00000332088 839 ntBASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 NOC2LP1-201ENST00000450578 752 ntBASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 RPS2P36-201ENST00000456516 831 ntBASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms