Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.79□□□□□ -0.04
HACD3Q9P035 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HACD3Q9P035 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HACD3Q9P035 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HACD3Q9P035 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HACD3Q9P035 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HACD3Q9P035 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HACD3Q9P035 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HACD3Q9P035 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 AP001267.2-201ENST00000532619 2086 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 PTENP1-202ENST00000532280 3996 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.78□□□□□ -0.04
HACD3Q9P035 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HACD3Q9P035 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 CICP12-201ENST00000455801 843 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.78□□□□□ -0.04
HACD3Q9P035 RNA5SP412-201ENST00000516234 123 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 EEF1DP1-201ENST00000585891 896 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 AC005840.4-201ENST00000541242 2494 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HACD3Q9P035 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.78□□□□□ -0.04
HACD3Q9P035 AL023775.1-201ENST00000454907 1746 ntBASIC14.78□□□□□ -0.04
HACD3Q9P035 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HACD3Q9P035 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 AL359183.1-201ENST00000623796 2132 ntBASIC14.77□□□□□ -0.04
HACD3Q9P035 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
HACD3Q9P035 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HACD3Q9P035 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HACD3Q9P035 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 MIR326-201ENST00000362220 95 ntBASIC14.77□□□□□ -0.05
HACD3Q9P035 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.77□□□□□ -0.05
HACD3Q9P035 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.77□□□□□ -0.05
HACD3Q9P035 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HACD3Q9P035 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.77□□□□□ -0.05
HACD3Q9P035 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.77□□□□□ -0.05
HACD3Q9P035 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.77□□□□□ -0.05
HACD3Q9P035 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.77□□□□□ -0.05
HACD3Q9P035 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.77□□□□□ -0.05
HACD3Q9P035 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.77□□□□□ -0.05
HACD3Q9P035 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.77□□□□□ -0.05
HACD3Q9P035 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HACD3Q9P035 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.77□□□□□ -0.05
HACD3Q9P035 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.77□□□□□ -0.05
HACD3Q9P035 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.77□□□□□ -0.05
HACD3Q9P035 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms