Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AC108734.2-201ENST00000420887 1069 ntBASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AL021707.6-201ENST00000609212 491 ntBASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 LINC00244-201ENST00000625073 613 ntBASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 FLJ16779-201ENST00000612722 7638 ntBASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 AC018529.2-202ENST00000611482 3087 ntBASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRMT13Q9NUP7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 RN7SL564P-201ENST00000496309 250 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 AC005586.2-201ENST00000563946 837 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 NDUFB10P1-201ENST00000567319 521 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 RN7SL596P-201ENST00000582123 288 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 AGAP7P-201ENST00000582299 2062 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 AGAP14-201ENST00000624701 2060 ntBASIC15.79■□□□□ 0.12
TRMT13Q9NUP7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 CTBP2P8-201ENST00000422584 1330 ntBASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 KRT17P4-201ENST00000429445 819 ntBASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 AC093826.1-201ENST00000508655 993 ntBASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.78■□□□□ 0.12
TRMT13Q9NUP7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms