Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.68□□□□□ -0.06
NDNQ99608 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NDNQ99608 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.68□□□□□ -0.06
NDNQ99608 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NDNQ99608 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
NDNQ99608 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NDNQ99608 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NDNQ99608 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDNQ99608 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 MST1P2-201ENST00000457982 2291 ntBASIC14.67□□□□□ -0.06
NDNQ99608 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NDNQ99608 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.67□□□□□ -0.06
NDNQ99608 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.67□□□□□ -0.06
NDNQ99608 AC007389.4-201ENST00000454674 793 ntBASIC14.67□□□□□ -0.06
NDNQ99608 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.67□□□□□ -0.06
NDNQ99608 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.67□□□□□ -0.06
NDNQ99608 AC011495.1-201ENST00000498085 584 ntBASIC14.67□□□□□ -0.06
NDNQ99608 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NDNQ99608 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.67□□□□□ -0.06
NDNQ99608 SLC25A47P1-201ENST00000531577 414 ntBASIC14.67□□□□□ -0.06
NDNQ99608 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.67□□□□□ -0.06
NDNQ99608 AC132938.2-201ENST00000579188 680 ntBASIC14.67□□□□□ -0.06
NDNQ99608 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.67□□□□□ -0.06
NDNQ99608 AL591163.1-201ENST00000641757 987 ntBASIC14.67□□□□□ -0.06
NDNQ99608 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.67□□□□□ -0.06
NDNQ99608 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.67□□□□□ -0.06
NDNQ99608 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
NDNQ99608 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NDNQ99608 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
NDNQ99608 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.66□□□□□ -0.06
NDNQ99608 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.66□□□□□ -0.06
NDNQ99608 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 AC011474.4-201ENST00000623523 2076 ntBASIC14.66□□□□□ -0.06
NDNQ99608 AC139712.1-201ENST00000378256 1875 ntBASIC14.66□□□□□ -0.06
NDNQ99608 AL591122.2-201ENST00000624125 1853 ntBASIC14.66□□□□□ -0.06
NDNQ99608 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.66□□□□□ -0.06
NDNQ99608 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NDNQ99608 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.66□□□□□ -0.06
NDNQ99608 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.66□□□□□ -0.06
NDNQ99608 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NDNQ99608 RN7SKP175-201ENST00000408472 289 ntBASIC14.66□□□□□ -0.06
NDNQ99608 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms