Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 RN7SKP214-201ENST00000364208 315 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AC020914.3-201ENST00000594712 304 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AL136295.7-201ENST00000619226 1200 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AHCYP4-201ENST00000419201 1315 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 TUBB8P4-201ENST00000511806 1324 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AC138028.6-201ENST00000616106 1482 ntBASIC20.93■□□□□ 0.94
SIN3AQ96ST3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.93■□□□□ 0.94
SIN3AQ96ST3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 KRT8P21-201ENST00000430398 1491 ntBASIC20.92■□□□□ 0.94
SIN3AQ96ST3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIN3AQ96ST3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 AC005077.2-201ENST00000449786 690 ntBASIC20.91■□□□□ 0.94
SIN3AQ96ST3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 SCARNA20.5-201ENST00000516991 142 ntBASIC20.91■□□□□ 0.94
SIN3AQ96ST3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SIN3AQ96ST3 AC244452.3-201ENST00000636814 210 ntBASIC20.91■□□□□ 0.94
SIN3AQ96ST3 AL805961.1-203ENST00000641078 1258 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms