Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 MIR600HG-201ENST00000449175 5984 ntBASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC022210.1-201ENST00000449856 793 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC119751.2-201ENST00000504529 210 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 RNA5SP412-201ENST00000516234 123 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC005324.6-201ENST00000587972 613 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC133540.1-201ENST00000620845 1019 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AL591471.1-201ENST00000621855 229 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AL035252.4-201ENST00000624174 288 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC007952.5-201ENST00000572818 1486 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 AC126755.1-201ENST00000525846 6405 ntBASIC14.16□□□□□ -0.14
PDLIM5Q96HC4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PDLIM5Q96HC4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms