Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 CU634019.7-201ENST00000624153 1185 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC005252.2-201ENST00000624630 1141 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 FP236241.2-201ENST00000624906 1185 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC111170.3-201ENST00000624282 2464 ntBASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RTN4IP1Q8WWV3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 RNU1-114P-201ENST00000365297 166 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 DGCR5-201ENST00000399539 862 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AP001063.1-201ENST00000568332 529 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC138761.1-201ENST00000584393 385 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC027307.3-201ENST00000594262 1100 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MIR6074-201ENST00000612054 107 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AP005019.2-201ENST00000615104 511 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 AL033527.5-201ENST00000641382 801 ntBASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RTN4IP1Q8WWV3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AC004899.2-201ENST00000622993 3860 ntBASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms