Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 BX322562.1-201ENST00000617004 561 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 RN7SL202P-201ENST00000584410 262 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AC009812.1-201ENST00000605948 1059 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 SALL4P6-201ENST00000429385 1691 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 MIR339-201ENST00000362153 94 ntBASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 AC010086.2-201ENST00000428616 226 ntBASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 ASLP1-201ENST00000428790 637 ntBASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 TPST2P1-201ENST00000564073 1102 ntBASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
ALMS1Q8TCU4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 IQCF4-203ENST00000428561 420 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ALDOAP1-201ENST00000491506 1078 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 MIR6165-201ENST00000614803 84 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC004910.1-201ENST00000433493 787 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC079250.1-201ENST00000456046 531 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC112250.1-201ENST00000504640 745 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 AL354702.1-201ENST00000442006 1960 ntBASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms