Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 TMEM198B-204ENST00000484016 896 ntBASIC13.19□□□□□ -0.3
ATG4DQ86TL0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 DUX4L45-201ENST00000566406 1057 ntBASIC13.19□□□□□ -0.3
ATG4DQ86TL0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 AC012183.1-201ENST00000625197 499 ntBASIC13.19□□□□□ -0.3
ATG4DQ86TL0 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.19□□□□□ -0.3
ATG4DQ86TL0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATG4DQ86TL0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 GOLGA2P4-201ENST00000441462 777 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AC099548.2-209ENST00000480264 625 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ZNF767P-206ENST00000513792 565 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RBM8B-201ENST00000555532 525 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 EEF1DP1-201ENST00000585891 896 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 Z98259.2-201ENST00000641583 609 ntBASIC13.18□□□□□ -0.3
ATG4DQ86TL0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATG4DQ86TL0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms