Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC243960.2-201ENST00000600996 747 ntBASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AL118558.3-201ENST00000607414 1079 ntBASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC39BQ5VTQ0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 AL590440.2-201ENST00000641973 1595 ntBASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 E2F3P2-201ENST00000447755 1422 ntBASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 AC012441.2-201ENST00000444843 739 ntBASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 AC020907.1-201ENST00000616460 1350 ntBASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC39BQ5VTQ0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms