Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 AC005840.4-201ENST00000541242 2494 ntBASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 KRT8P24-201ENST00000560290 1559 ntBASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN20Q4JDL3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 OR2R1P-201ENST00000441404 914 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 HLA-J-204ENST00000495278 958 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC124068.2-201ENST00000569473 1109 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC007663.3-201ENST00000609632 465 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC091271.1-201ENST00000611877 1162 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 LAP3P2-201ENST00000454686 1454 ntBASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN20Q4JDL3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN20Q4JDL3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms