Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 CNN2P2-201ENST00000443536 909 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 CNN2P3-201ENST00000450201 906 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 HLA-J-203ENST00000494367 1087 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC010327.4-202ENST00000591484 748 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 AL049840.4-201ENST00000602422 811 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AL136317.3-201ENST00000618497 906 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 PTPRVP-205ENST00000641549 5067 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDNFQ49AH0 AC003102.2-201ENST00000589195 1469 ntBASIC12.59□□□□□ -0.39
CDNFQ49AH0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.59□□□□□ -0.39
CDNFQ49AH0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.58□□□□□ -0.39
CDNFQ49AH0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDNFQ49AH0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDNFQ49AH0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.58□□□□□ -0.39
CDNFQ49AH0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.58□□□□□ -0.39
CDNFQ49AH0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 AL157996.1-201ENST00000624684 2299 ntBASIC12.58□□□□□ -0.4
CDNFQ49AH0 AGAP10P-201ENST00000454844 2418 ntBASIC12.58□□□□□ -0.4
CDNFQ49AH0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 RPSAP43-201ENST00000402237 625 ntBASIC12.58□□□□□ -0.4
CDNFQ49AH0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 AC254562.1-201ENST00000417586 456 ntBASIC12.58□□□□□ -0.4
CDNFQ49AH0 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.58□□□□□ -0.4
CDNFQ49AH0 CNN2P11-201ENST00000429351 262 ntBASIC12.58□□□□□ -0.4
CDNFQ49AH0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDNFQ49AH0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms