Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 AC087386.2-201ENST00000623212 4637 ntBASIC13.86□□□□□ -0.19
SKP1P63208 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.85□□□□□ -0.19
SKP1P63208 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SKP1P63208 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SKP1P63208 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SKP1P63208 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SKP1P63208 FAM86MP-201ENST00000340703 885 ntBASIC13.85□□□□□ -0.19
SKP1P63208 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.85□□□□□ -0.19
SKP1P63208 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 AL008707.1-201ENST00000422498 534 ntBASIC13.85□□□□□ -0.19
SKP1P63208 AL645933.1-201ENST00000440087 609 ntBASIC13.85□□□□□ -0.19
SKP1P63208 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.85□□□□□ -0.19
SKP1P63208 AC091804.1-201ENST00000486888 567 ntBASIC13.85□□□□□ -0.19
SKP1P63208 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 AC008805.1-201ENST00000590892 364 ntBASIC13.85□□□□□ -0.19
SKP1P63208 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 AC243960.2-201ENST00000600996 747 ntBASIC13.85□□□□□ -0.19
SKP1P63208 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SKP1P63208 AC004923.1-202ENST00000642106 209 ntBASIC13.85□□□□□ -0.19
SKP1P63208 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SKP1P63208 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 AHCYP4-201ENST00000419201 1315 ntBASIC13.85□□□□□ -0.19
SKP1P63208 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SKP1P63208 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.85□□□□□ -0.19
SKP1P63208 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SKP1P63208 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SKP1P63208 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SKP1P63208 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.84□□□□□ -0.19
SKP1P63208 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 AC004899.1-201ENST00000424687 1714 ntBASIC13.84□□□□□ -0.19
SKP1P63208 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 AC006504.5-208ENST00000588784 2401 ntBASIC13.84□□□□□ -0.19
SKP1P63208 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SKP1P63208 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SKP1P63208 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SKP1P63208 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SKP1P63208 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.84□□□□□ -0.19
SKP1P63208 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms