Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC241585.1-201ENST00000433527 519 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 FAM86GP-201ENST00000448322 971 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 AC009477.1-201ENST00000452936 217 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 AC026434.2-201ENST00000506094 1078 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 SPDYE18-201ENST00000510091 1050 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 IGHV3-42-201ENST00000520410 361 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.3□□□□□ -0.28
CXCR4P61073 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.3□□□□□ -0.28
CXCR4P61073 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.3□□□□□ -0.28
CXCR4P61073 SRD5A3P1-201ENST00000603021 949 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 AP001002.3-201ENST00000623482 206 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 AC064801.2-201ENST00000625052 1303 ntBASIC13.3□□□□□ -0.28
CXCR4P61073 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.3□□□□□ -0.28
CXCR4P61073 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CXCR4P61073 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CXCR4P61073 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.29□□□□□ -0.28
CXCR4P61073 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CXCR4P61073 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 ABCD1P2-201ENST00000429313 1601 ntBASIC13.29□□□□□ -0.28
CXCR4P61073 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.29□□□□□ -0.28
CXCR4P61073 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.29□□□□□ -0.28
CXCR4P61073 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.29□□□□□ -0.28
CXCR4P61073 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.29□□□□□ -0.28
CXCR4P61073 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CXCR4P61073 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CXCR4P61073 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CXCR4P61073 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.29□□□□□ -0.28
CXCR4P61073 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms