Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDL3P58872 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHBDL3P58872 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 LINC00265-2P-201ENST00000413372 782 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 RPL13AP19-201ENST00000434320 584 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 AC092638.2-201ENST00000441105 947 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.93■□□□□ 0.3
RHBDL3P58872 KRT18P15-201ENST00000458108 1291 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 RN7SL788P-201ENST00000460504 316 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.93■□□□□ 0.3
RHBDL3P58872 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDL3P58872 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 CHCHD2P2-201ENST00000503744 321 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.93■□□□□ 0.3
RHBDL3P58872 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.93■□□□□ 0.3
RHBDL3P58872 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 AC140113.1-201ENST00000603467 169 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 AP000322.3-201ENST00000608665 388 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 AL132780.4-201ENST00000624870 1135 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDL3P58872 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 KRT8P18-201ENST00000413425 1445 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 AP002414.2-201ENST00000591780 3365 ntBASIC16.93■□□□□ 0.3
RHBDL3P58872 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RHBDL3P58872 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDL3P58872 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 HSPA8P5-201ENST00000456928 2069 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AL355334.1-201ENST00000417713 215 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC004837.1-201ENST00000446267 564 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 RN7SL564P-201ENST00000496309 250 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDL3P58872 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDL3P58872 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 RN7SL357P-201ENST00000581065 298 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC009084.3-201ENST00000623356 437 ntBASIC16.92■□□□□ 0.3
RHBDL3P58872 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDL3P58872 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDL3P58872 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RHBDL3P58872 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms