Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CLK1P49759 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.81□□□□□ -0.2
CLK1P49759 AC114812.1-204ENST00000449669 728 ntBASIC13.81□□□□□ -0.2
CLK1P49759 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.81□□□□□ -0.2
CLK1P49759 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.81□□□□□ -0.2
CLK1P49759 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.81□□□□□ -0.2
CLK1P49759 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLK1P49759 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.81□□□□□ -0.2
CLK1P49759 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.81□□□□□ -0.2
CLK1P49759 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.81□□□□□ -0.2
CLK1P49759 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.81□□□□□ -0.2
CLK1P49759 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.81□□□□□ -0.2
CLK1P49759 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLK1P49759 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.81□□□□□ -0.2
CLK1P49759 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLK1P49759 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLK1P49759 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 REXO1L4P-201ENST00000605109 1937 ntBASIC13.8□□□□□ -0.2
CLK1P49759 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLK1P49759 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLK1P49759 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 TPT1P11-201ENST00000458482 498 ntBASIC13.8□□□□□ -0.2
CLK1P49759 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.8□□□□□ -0.2
CLK1P49759 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.8□□□□□ -0.2
CLK1P49759 AP001063.1-201ENST00000568332 529 ntBASIC13.8□□□□□ -0.2
CLK1P49759 AC009486.1-201ENST00000569860 813 ntBASIC13.8□□□□□ -0.2
CLK1P49759 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.8□□□□□ -0.2
CLK1P49759 CTBP2P3-201ENST00000585629 1255 ntBASIC13.8□□□□□ -0.2
CLK1P49759 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 AL360270.3-201ENST00000609118 1348 ntBASIC13.8□□□□□ -0.2
CLK1P49759 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.8□□□□□ -0.2
CLK1P49759 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLK1P49759 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLK1P49759 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.79□□□□□ -0.2
CLK1P49759 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.79□□□□□ -0.2
CLK1P49759 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLK1P49759 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms