Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.79□□□□□ -0.2
CDKN2CP42773 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDKN2CP42773 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.79□□□□□ -0.2
CDKN2CP42773 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDKN2CP42773 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 AC004945.1-201ENST00000416738 983 ntBASIC13.78□□□□□ -0.2
CDKN2CP42773 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.78□□□□□ -0.2
CDKN2CP42773 AC025279.2-201ENST00000569730 653 ntBASIC13.78□□□□□ -0.2
CDKN2CP42773 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CDKN2CP42773 OR10B1P-201ENST00000601666 907 ntBASIC13.78□□□□□ -0.2
CDKN2CP42773 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.78□□□□□ -0.2
CDKN2CP42773 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.78□□□□□ -0.2
CDKN2CP42773 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 AC073548.1-201ENST00000624088 1882 ntBASIC13.78□□□□□ -0.2
CDKN2CP42773 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDKN2CP42773 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.78□□□□□ -0.2
CDKN2CP42773 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDKN2CP42773 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.77□□□□□ -0.2
CDKN2CP42773 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CDKN2CP42773 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
CDKN2CP42773 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDKN2CP42773 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDKN2CP42773 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.77□□□□□ -0.21
CDKN2CP42773 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN2CP42773 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDKN2CP42773 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN2CP42773 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN2CP42773 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDKN2CP42773 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.77□□□□□ -0.21
CDKN2CP42773 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms