Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 MIR658-201ENST00000385210 100 ntBASIC17.47■□□□□ 0.39
CHMLP26374 KRT18P36-201ENST00000411618 1276 ntBASIC17.47■□□□□ 0.39
CHMLP26374 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 BNIP3P42-201ENST00000454982 569 ntBASIC17.47■□□□□ 0.39
CHMLP26374 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMLP26374 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMLP26374 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.47■□□□□ 0.39
CHMLP26374 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 AC124068.2-201ENST00000569473 1109 ntBASIC17.47■□□□□ 0.39
CHMLP26374 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 BNIP3P29-201ENST00000598302 571 ntBASIC17.47■□□□□ 0.39
CHMLP26374 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.47■□□□□ 0.39
CHMLP26374 AC011447.5-201ENST00000616168 564 ntBASIC17.47■□□□□ 0.39
CHMLP26374 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHMLP26374 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CHMLP26374 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHMLP26374 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CHMLP26374 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.46■□□□□ 0.39
CHMLP26374 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 RNA5SP412-201ENST00000516234 123 ntBASIC17.46■□□□□ 0.39
CHMLP26374 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMLP26374 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.46■□□□□ 0.39
CHMLP26374 AC021016.3-201ENST00000608367 477 ntBASIC17.46■□□□□ 0.39
CHMLP26374 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.46■□□□□ 0.39
CHMLP26374 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHMLP26374 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHMLP26374 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.46■□□□□ 0.39
CHMLP26374 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
CHMLP26374 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHMLP26374 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHMLP26374 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMLP26374 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMLP26374 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.45■□□□□ 0.38
CHMLP26374 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 AC022217.1-201ENST00000521069 738 ntBASIC17.45■□□□□ 0.38
CHMLP26374 IGHV3-71-201ENST00000523324 359 ntBASIC17.45■□□□□ 0.38
CHMLP26374 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMLP26374 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHMLP26374 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
CHMLP26374 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.45■□□□□ 0.38
CHMLP26374 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 AC005324.6-201ENST00000587972 613 ntBASIC17.45■□□□□ 0.38
CHMLP26374 AC017083.2-201ENST00000608069 979 ntBASIC17.45■□□□□ 0.38
CHMLP26374 AC090386.2-201ENST00000623010 1039 ntBASIC17.45■□□□□ 0.38
CHMLP26374 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms