Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CD40P25942 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CD40P25942 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CD40P25942 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CD40P25942 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CD40P25942 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.52□□□□□ -0.4
CD40P25942 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
CD40P25942 INTS4P1-203ENST00000641008 3683 ntBASIC12.52□□□□□ -0.41
CD40P25942 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.52□□□□□ -0.41
CD40P25942 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.52□□□□□ -0.41
CD40P25942 ELK2AP-201ENST00000392510 1007 ntBASIC12.52□□□□□ -0.41
CD40P25942 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.52□□□□□ -0.41
CD40P25942 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 AC234782.1-201ENST00000451950 919 ntBASIC12.52□□□□□ -0.41
CD40P25942 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 RN7SL258P-201ENST00000478664 300 ntBASIC12.52□□□□□ -0.41
CD40P25942 AC008723.1-201ENST00000506922 207 ntBASIC12.52□□□□□ -0.41
CD40P25942 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.52□□□□□ -0.41
CD40P25942 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 MIR6074-201ENST00000612054 107 ntBASIC12.52□□□□□ -0.41
CD40P25942 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.52□□□□□ -0.41
CD40P25942 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.52□□□□□ -0.41
CD40P25942 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CD40P25942 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.52□□□□□ -0.41
CD40P25942 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.52□□□□□ -0.41
CD40P25942 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CD40P25942 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 MAGEA5-201ENST00000446757 942 ntBASIC12.51□□□□□ -0.41
CD40P25942 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.51□□□□□ -0.41
CD40P25942 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.51□□□□□ -0.41
CD40P25942 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.51□□□□□ -0.41
CD40P25942 LINC01783-202ENST00000614408 828 ntBASIC12.51□□□□□ -0.41
CD40P25942 BX284668.2-205ENST00000619677 828 ntBASIC12.51□□□□□ -0.41
CD40P25942 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CD40P25942 AC006453.1-201ENST00000636037 1257 ntBASIC12.51□□□□□ -0.41
CD40P25942 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms