Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO1P25800 AC005562.1-201ENST00000583030 3219 ntBASIC12.24□□□□□ -0.45
LMO1P25800 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.24□□□□□ -0.45
LMO1P25800 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 AC114271.1-201ENST00000612689 2813 ntBASIC12.24□□□□□ -0.45
LMO1P25800 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.24□□□□□ -0.45
LMO1P25800 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.24□□□□□ -0.45
LMO1P25800 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 PTENP1-202ENST00000532280 3996 ntBASIC12.24□□□□□ -0.45
LMO1P25800 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AC004241.5-201ENST00000623870 2448 ntBASIC12.23□□□□□ -0.45
LMO1P25800 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 AL023775.1-201ENST00000454907 1746 ntBASIC12.23□□□□□ -0.45
LMO1P25800 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 KRT8P4-201ENST00000509735 1454 ntBASIC12.23□□□□□ -0.45
LMO1P25800 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.23□□□□□ -0.45
LMO1P25800 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 IGHV3-71-201ENST00000523324 359 ntBASIC12.23□□□□□ -0.45
LMO1P25800 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO1P25800 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO1P25800 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AC023310.1-201ENST00000554836 735 ntBASIC12.23□□□□□ -0.45
LMO1P25800 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 PPY2P-201ENST00000582808 702 ntBASIC12.23□□□□□ -0.45
LMO1P25800 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.23□□□□□ -0.45
LMO1P25800 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AL136301.1-201ENST00000615830 422 ntBASIC12.23□□□□□ -0.45
LMO1P25800 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 AL162274.1-201ENST00000617191 1098 ntBASIC12.23□□□□□ -0.45
LMO1P25800 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LMO1P25800 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 AC068760.1-201ENST00000493579 1953 ntBASIC12.23□□□□□ -0.45
LMO1P25800 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LMO1P25800 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LMO1P25800 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AC023794.5-201ENST00000564380 2157 ntBASIC12.22□□□□□ -0.45
LMO1P25800 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AC090643.2-201ENST00000623442 2029 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms