Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB1P11230 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB1P11230 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 ST13P19-201ENST00000442505 1124 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CHRNB1P11230 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB1P11230 LINC00634-202ENST00000505157 222 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 AC084752.1-201ENST00000509766 622 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 RNA5SP417-201ENST00000516459 108 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB1P11230 AC138701.2-201ENST00000553634 226 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 KRT8P1-201ENST00000557533 1207 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 AL022344.2-201ENST00000568976 968 ntBASIC14.72□□□□□ -0.05
CHRNB1P11230 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNB1P11230 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB1P11230 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB1P11230 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB1P11230 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB1P11230 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB1P11230 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB1P11230 AC107918.4-201ENST00000641966 3141 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB1P11230 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 BCAS2P2-201ENST00000425064 674 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB1P11230 AL512306.1-201ENST00000432698 848 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB1P11230 DPY19L2P5-201ENST00000456300 331 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 AC026410.1-201ENST00000507366 1101 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB1P11230 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 HERC2P11-201ENST00000562845 725 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 AC100756.2-201ENST00000569537 736 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 AP000322.3-201ENST00000608665 388 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 FLJ16779-201ENST00000612722 7638 ntBASIC14.71□□□□□ -0.05
CHRNB1P11230 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNB1P11230 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNB1P11230 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB1P11230 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNB1P11230 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNB1P11230 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
CHRNB1P11230 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB1P11230 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB1P11230 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB1P11230 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB1P11230 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB1P11230 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNB1P11230 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB1P11230 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
CHRNB1P11230 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNB1P11230 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNB1P11230 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB1P11230 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNB1P11230 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNB1P11230 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNB1P11230 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.71□□□□□ -0.06
CHRNB1P11230 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CHRNB1P11230 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms