Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.73■□□□□ 0.91
CHGAP10645 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC20.73■□□□□ 0.91
CHGAP10645 AL021707.6-201ENST00000609212 491 ntBASIC20.73■□□□□ 0.91
CHGAP10645 AC073592.2-201ENST00000623062 780 ntBASIC20.73■□□□□ 0.91
CHGAP10645 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 LAP3P2-201ENST00000454686 1454 ntBASIC20.73■□□□□ 0.91
CHGAP10645 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.73■□□□□ 0.91
CHGAP10645 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 AC018442.1-201ENST00000421439 2061 ntBASIC20.73■□□□□ 0.91
CHGAP10645 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CHGAP10645 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 AC067931.2-201ENST00000623655 2003 ntBASIC20.72■□□□□ 0.91
CHGAP10645 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.72■□□□□ 0.91
CHGAP10645 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 CELP-201ENST00000411440 1249 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.72■□□□□ 0.91
CHGAP10645 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.72■□□□□ 0.91
CHGAP10645 AC018638.5-201ENST00000450885 754 ntBASIC20.72■□□□□ 0.91
CHGAP10645 SCARNA12-201ENST00000459155 270 ntBASIC20.72■□□□□ 0.91
CHGAP10645 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.72■□□□□ 0.91
CHGAP10645 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.72■□□□□ 0.91
CHGAP10645 AL133467.4-201ENST00000602953 725 ntBASIC20.72■□□□□ 0.91
CHGAP10645 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 AGAP7P-201ENST00000582299 2062 ntBASIC20.72■□□□□ 0.91
CHGAP10645 AGAP14-201ENST00000624701 2060 ntBASIC20.72■□□□□ 0.91
CHGAP10645 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 AP002414.2-201ENST00000591780 3365 ntBASIC20.72■□□□□ 0.91
CHGAP10645 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CHGAP10645 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHGAP10645 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CHGAP10645 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHGAP10645 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.71■□□□□ 0.91
CHGAP10645 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.71■□□□□ 0.91
CHGAP10645 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.71■□□□□ 0.91
CHGAP10645 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.71■□□□□ 0.91
CHGAP10645 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC20.71■□□□□ 0.91
CHGAP10645 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.71■□□□□ 0.91
CHGAP10645 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHGAP10645 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGAP10645 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGAP10645 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CHGAP10645 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGAP10645 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGAP10645 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.7■□□□□ 0.9
CHGAP10645 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGAP10645 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGAP10645 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHGAP10645 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC20.7■□□□□ 0.9
CHGAP10645 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms