Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.08■□□□□ 0.17
LOC285556D6RIA3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LOC285556D6RIA3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 ENPP7P8-202ENST00000527856 1345 ntBASIC16.08■□□□□ 0.16
LOC285556D6RIA3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 AC103563.1-201ENST00000429316 123 ntBASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.08■□□□□ 0.16
LOC285556D6RIA3 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.08■□□□□ 0.16
LOC285556D6RIA3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 TBC1D3P6-201ENST00000505954 962 ntBASIC16.07■□□□□ 0.16
LOC285556D6RIA3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 BAP1-211ENST00000615113 489 ntBASIC16.07■□□□□ 0.16
LOC285556D6RIA3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 HSPA8P5-201ENST00000456928 2069 ntBASIC16.07■□□□□ 0.16
LOC285556D6RIA3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LOC285556D6RIA3 HTR7P1-202ENST00000624664 4411 ntBASIC16.07■□□□□ 0.16
LOC285556D6RIA3 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LOC285556D6RIA3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LOC285556D6RIA3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LOC285556D6RIA3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.06■□□□□ 0.16
LOC285556D6RIA3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms