Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC144831.1-201ENST00000573312 2656 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 BX679664.3-201ENST00000414070 555 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 ERP29P1-201ENST00000442902 706 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC018638.5-201ENST00000450885 754 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC113935.1-201ENST00000471722 555 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AL512310.5-201ENST00000551999 515 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 NUDT4P2-201ENST00000578341 546 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 MIR4649-201ENST00000582839 64 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC009145.4-201ENST00000625119 1294 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.65□□□□□ -0.38
MBD3L3A6NE82 AC007952.5-201ENST00000572818 1486 ntBASIC12.65□□□□□ -0.38
MBD3L3A6NE82 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MBD3L3A6NE82 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
MBD3L3A6NE82 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
MBD3L3A6NE82 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.65□□□□□ -0.39
MBD3L3A6NE82 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 GUSBP10-201ENST00000417412 665 ntBASIC12.64□□□□□ -0.39
MBD3L3A6NE82 PPP1R2P4-201ENST00000424051 595 ntBASIC12.64□□□□□ -0.39
MBD3L3A6NE82 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.64□□□□□ -0.39
MBD3L3A6NE82 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms