Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PCDHA5-203ENST00000614258 4248 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 CLK3P2-201ENST00000427566 1453 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AL158070.2-201ENST00000623713 1621 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 TSSK5P-201ENST00000423978 907 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 HLA-K-203ENST00000430151 1046 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AOC4P-203ENST00000566825 2289 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 DRD5P1-201ENST00000456605 1438 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 AL137783.1-201ENST00000623494 1896 ntBASIC15.9■□□□□ 0.14
CCDC66A2RUB6 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC66A2RUB6 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC66A2RUB6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC66A2RUB6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC66A2RUB6 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 BX324167.2-201ENST00000623717 3316 ntBASIC15.89■□□□□ 0.13
CCDC66A2RUB6 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 KRT8P24-201ENST00000560290 1559 ntBASIC15.89■□□□□ 0.13
CCDC66A2RUB6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 VENTXP1-201ENST00000569334 2716 ntBASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms