Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC020910.6-201ENST00000623084 1459 ntBASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPO2Q9UMS6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC092978.1-202ENST00000637590 1327 ntBASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AL591122.2-201ENST00000624125 1853 ntBASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC007250.1-201ENST00000608934 338 ntBASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AC232323.1-201ENST00000540724 2099 ntBASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SYNPO2Q9UMS6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AC103702.1-201ENST00000548801 2630 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AC092638.2-201ENST00000441105 947 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AL354861.1-201ENST00000445213 355 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 RN7SL8P-201ENST00000461771 266 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 OR5BD1P-201ENST00000532527 817 ntBASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SYNPO2Q9UMS6 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SYNPO2Q9UMS6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms