Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 AP005019.2-201ENST00000615104 511 ntBASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TIMMDC1Q9NPL8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 RPL5P21-201ENST00000404620 815 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 NUS1P3-201ENST00000423502 862 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 KRT223P-202ENST00000449164 1292 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 KLF2P4-201ENST00000451959 1225 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TIMMDC1Q9NPL8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TIMMDC1Q9NPL8 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TIMMDC1Q9NPL8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
TIMMDC1Q9NPL8 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.15□□□□□ -0.15
TIMMDC1Q9NPL8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 AC084364.1-201ENST00000551967 1556 ntBASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 C2orf27AP3-201ENST00000434123 579 ntBASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TIMMDC1Q9NPL8 AC004066.1-201ENST00000502488 802 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms