Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 AP000356.3-201ENST00000382243 753 ntBASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 RPSAP15-201ENST00000448168 861 ntBASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 TMCO5B-205ENST00000530020 894 ntBASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 AL353726.2-201ENST00000623259 884 ntBASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 BRD7P5-201ENST00000299197 1822 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 MIR557-201ENST00000385239 98 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AC073869.2-201ENST00000417338 1026 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 EEF1DP2-201ENST00000433698 843 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 NOC2LP1-201ENST00000450578 752 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AC025262.2-201ENST00000623975 1056 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 FAM90A2P-201ENST00000511144 1395 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 FAM90A25P-201ENST00000528404 1395 ntBASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KIAA1549Q9HCM3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC026316.1-201ENST00000398900 414 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 RPL8P2-201ENST00000430538 502 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 AC026320.2-201ENST00000434379 478 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 RN7SL258P-201ENST00000478664 300 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 POU5F1P2-201ENST00000521750 823 ntBASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KIAA1549Q9HCM3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms