Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 LTB4R2-202ENST00000528054 3092 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 TUBB8P9-201ENST00000422534 1276 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 TUBB8P10-201ENST00000430210 1279 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 YY1P2-201ENST00000438766 948 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 MIR632-201ENST00000385193 94 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 AC140658.4-201ENST00000561990 352 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CDIPT-AS1-203ENST00000638164 713 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 AC092115.1-201ENST00000566277 1402 ntBASIC13.14□□□□□ -0.31
CHD8Q9HCK8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC005011.1-201ENST00000455206 210 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AP001505.1-201ENST00000569966 824 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC090616.6-202ENST00000583601 1088 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC002350.2-201ENST00000623894 1828 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC106872.9-201ENST00000512437 1393 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms