Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 MEG3_2.1-201ENST00000611456 105 ntBASIC16.92■□□□□ 0.3
SLF1Q9BQI6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 TBC1D3J-201ENST00000620719 1426 ntBASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 FRMPD2B-201ENST00000431305 1347 ntBASIC16.92■□□□□ 0.3
SLF1Q9BQI6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLF1Q9BQI6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 MIR33B-201ENST00000385104 96 ntBASIC16.91■□□□□ 0.3
SLF1Q9BQI6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 FXNP2-201ENST00000411625 547 ntBASIC16.91■□□□□ 0.3
SLF1Q9BQI6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 AL365209.1-201ENST00000624418 6473 ntBASIC16.91■□□□□ 0.3
SLF1Q9BQI6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 AHCYP4-201ENST00000419201 1315 ntBASIC16.91■□□□□ 0.3
SLF1Q9BQI6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLF1Q9BQI6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 LINC01165-201ENST00000445190 1623 ntBASIC16.9■□□□□ 0.3
SLF1Q9BQI6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 RN7SL258P-201ENST00000478664 300 ntBASIC16.9■□□□□ 0.3
SLF1Q9BQI6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.9■□□□□ 0.3
SLF1Q9BQI6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 AC003686.1-201ENST00000550956 1034 ntBASIC16.9■□□□□ 0.3
SLF1Q9BQI6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms