Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TNRC18P2-201ENST00000417666 2714 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 BCYRN1-201ENST00000418539 200 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 XBP1P1-201ENST00000436573 652 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AC005077.2-201ENST00000449786 690 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 HIST2H2BC-201ENST00000498492 580 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RCC2P8-201ENST00000502779 1035 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SORD2P-201ENST00000558556 1069 ntBASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2E2Q96LR5 CYP4F23P-201ENST00000593402 1579 ntBASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 Z97180.1-201ENST00000445173 988 ntBASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms