Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHAMP1Q96JM3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 AL132655.2-201ENST00000596276 594 ntBASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHAMP1Q96JM3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AL365209.1-201ENST00000624418 6473 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 MESTP3-201ENST00000503460 968 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AC008494.3-201ENST00000606615 944 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AC138466.3-201ENST00000619983 221 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AC007541.1-201ENST00000570282 1469 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms