Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AC092896.1-201ENST00000465850 380 ntBASIC15.67■□□□□ 0.1
LRCH3Q96II8 RPS18P9-201ENST00000482817 460 ntBASIC15.67■□□□□ 0.1
LRCH3Q96II8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.67■□□□□ 0.1
LRCH3Q96II8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRCH3Q96II8 AL360270.3-201ENST00000609118 1348 ntBASIC15.67■□□□□ 0.1
LRCH3Q96II8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
LRCH3Q96II8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 SSR4P1-203ENST00000599569 2260 ntBASIC15.66■□□□□ 0.1
LRCH3Q96II8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AL136172.1-201ENST00000598590 1394 ntBASIC15.66■□□□□ 0.1
LRCH3Q96II8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AL157823.1-201ENST00000403727 628 ntBASIC15.66■□□□□ 0.1
LRCH3Q96II8 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AC113347.2-201ENST00000512350 279 ntBASIC15.66■□□□□ 0.1
LRCH3Q96II8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AC006116.2-201ENST00000589958 988 ntBASIC15.66■□□□□ 0.1
LRCH3Q96II8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH3Q96II8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH3Q96II8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms