Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 RPL13AP3-202ENST00000494676 1473 ntBASIC14.27□□□□□ -0.12
CLDN23Q96B33 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN23Q96B33 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN23Q96B33 LINC00115-201ENST00000473798 1317 ntBASIC14.27□□□□□ -0.12
CLDN23Q96B33 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 SLC25A15P3-201ENST00000505530 290 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 AC087203.1-201ENST00000532111 1181 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 RN7SL455P-201ENST00000580629 282 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 RN7SL121P-201ENST00000584223 273 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 TYMSP2-201ENST00000589501 424 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 AC073869.4-201ENST00000620841 800 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 DOC2GP-204ENST00000639052 2548 ntBASIC14.27□□□□□ -0.13
CLDN23Q96B33 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN23Q96B33 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN23Q96B33 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 RN7SL556P-201ENST00000582856 298 ntBASIC14.26□□□□□ -0.13
CLDN23Q96B33 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 AC005274.1-201ENST00000623460 802 ntBASIC14.26□□□□□ -0.13
CLDN23Q96B33 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN23Q96B33 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN23Q96B33 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN23Q96B33 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN23Q96B33 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLDN23Q96B33 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN23Q96B33 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms