Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 AC004801.1-201ENST00000549557 360 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 PRMT1P1-201ENST00000604252 1009 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 AC010531.8-201ENST00000623341 685 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 HYMAI-201ENST00000635591 3347 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 KRT8P43-201ENST00000406052 1458 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
COL23A1Q86Y22 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 AL365203.3-201ENST00000609742 2057 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 SIRPB3P-201ENST00000340424 1216 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 AC010900.1-201ENST00000449849 1296 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 URB1-AS1-201ENST00000534991 831 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 AC020931.1-201ENST00000589622 1346 ntBASIC17.86■□□□□ 0.45
COL23A1Q86Y22 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.86■□□□□ 0.45
COL23A1Q86Y22 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AL121949.3-201ENST00000406684 385 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AC098657.1-201ENST00000416270 1135 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AL137244.1-201ENST00000422931 865 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 PEBP1P3-201ENST00000455475 548 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AL359219.1-201ENST00000556311 934 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 AL357143.1-203ENST00000639750 881 ntBASIC17.85■□□□□ 0.45
COL23A1Q86Y22 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL23A1Q86Y22 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms