Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 RN7SL523P-201ENST00000484401 298 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC084262.1-201ENST00000567818 751 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC005865.2-202ENST00000635814 725 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 GUCY2EP-203ENST00000531117 1918 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 MIR4265-201ENST00000582152 99 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 AC073869.4-201ENST00000620841 800 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 AC073210.1-201ENST00000414799 232 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 AC093300.1-201ENST00000510368 1201 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 AP000354.1-201ENST00000396982 456 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 AL773545.2-201ENST00000442149 472 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 EEF1DP7-201ENST00000580496 513 ntBASIC11.72□□□□□ -0.53
VPS13CQ709C8 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VPS13CQ709C8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VPS13CQ709C8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 AC092384.3-202ENST00000564646 2873 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 U73169.1-201ENST00000395152 367 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 EEF1GP8-201ENST00000506566 1154 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 AC145285.5-201ENST00000562217 361 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
VPS13CQ709C8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VPS13CQ709C8 AL353622.2-201ENST00000605846 425 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 AL359091.4-201ENST00000610052 409 ntBASIC11.71□□□□□ -0.53
VPS13CQ709C8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms